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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812849.1_cds_XP_016497317.1_11457
CDS Infomation

[gene=LOC107816143] [db_xref=GeneID:107816143] [protein=IQ domain-containing protein IQM2] [protein_id=XP_016497317.1] [location=join(81645..82078,82169..82283,82380..82445,82534..82622,82711..82801,82911..83150,83253..83354,83435..84205)] [gbkey=CDS]
Sequence

ATGGGGTTATCCTTTTCATACCCACTTGCCTCTCATAGTGATTTGGAAACTTCCCTTGAA
TCTGTCATTGTGAAATCTATTGATTTTGGATACGATGAGGGAAAGACGCTACTACAATCA
GTTAGCTTCAAGAGTAAAGATACAGAACCAACAATACTGCAATCGGATGGCTTTGGAAAG
ATGTCGATAGAAAAAACTGTAAGCTTTAGGACAATGGAAAATGCAATGGAGTTCAGTAAA
ACTTCATCAGAAGAGAAGCACGAGTTTAATGAGTTTCGTAGGTTAGACAACATGAACGGA
GAGTCTCCAAAATCTCCTCTAGTATATACTAACAGCCCCAAACATGAAGCAGCTTTAAAA
TTGCAGAAAGTGTACAAGAGCTTTAGGACTAGAAGAAAATTAGCAGACTGTGCTGTACTT
ATAGAGCAAAGCTGGTGGAAGCTATTAGATTTTGCAGAACTCAAACATAGTTCTATTTCA
TTTTTTGATCTTGATAAACACGAGACAGCAGTTTCACGTTGGTCGAGGGCAAGAACTAGA
GCAGCCAAGGTTGGCAAAGGCTTATCTAAAAATGGCAAAGCCCAGAAATTAGCGTTACAG
CACTGGCTGGAAGCTATTGACCCACGACATCGTTATGGACACAACTTGCATTTCTATTAT
GTCCAATGGTTGCATTCTCAAAGCAAGGAGCCCTTCTTCTACTGGTTGGATATTGGAGAA
GGAAAAGAAGTGAATATTGTTGACAAATGCCCTCGATGGAAACTTCAGCAGCAGTGCATT
AAGTACCTTGGTCCGATGGAAAGAAAGGCTTATGAAGTTGAAGTGCAAGATGGGAAGCTC
TTCTACAAGGAAACAGGGAAGCTCCTTAACACTACCGATGAACCAAAAGGTGCTAAGTGG
ATTTTTGTCCTTAGCACCTCTAAAACTTTATATGTTGGCAAGAAATCGAAAGGCACATTT
CAGCACTCCAGCTTCTTGGCTGGAGGAGCCACATTAGCGGCTGGGAGAATAGTTGCCGAA
CAAGGAGTGTTGAAGGCTGTCTGGCCTCATAGTGGACATTACCGACCTACCCCAGAAAAC
TTCCAGGACTTTGTTTCATTCATGAGGGAGAACAATGTCGACCTCAATGATGTTAAGCTT
GATTCCGACGAAGATGAGCAAGAATCCGTTGGCAAGAAGAGTGGTGTTTTCCTCAGAGGC
AACTCTTCTGAGGATGACTTTCAAAAAGATGTTTTGGAGACGGAAGCGAATGTTTTAGAA
GAGTCAACTTCAGAGAAAAGTGACTTGAAAGTACAACAGAATGCTGCTGATATACAACTA
TCCGATTCAAAACCATCTCATAGCTTCAGTAGCAAATTGACTAATCTTCAAATTCCAAGC
AATGATGATTTCTTACAGAAATTAAAAAATGAAAGCGAAGCTACTAAATCTAGTTCCAAC
TCCTTCTCATTAGAATCACCGTCAGACGGATATGAAACAGCAGAAGAACTGTTTGCTCTT
GAAAAAGATCAAACAGATTTAGAACACAGCTCTTCTATCGAAGAGCTCGAGGAAAGTAAA
GAAGAGATAATTCCAGAAGAATCTATTATCCAAAGGATAAATTCACACAAGGATCTTAAA
TCATATCAGTTGGGAAAGCAACTGTCCTGCAAATGGAGCACCGGAGCTGGACCTCGAATC
GGATGCTTGAGGGATTACCCTTCACAGCTGCAATCCCATGCTTTAGAACAAGTGAGCTTG
TCCCCGAGAAGTGCTTGCCGTCTCAAGATGAGCTTCCCTTCGAGGGCATCAACGCCAACG
ACCTTGAGCAGGGTAATGCAGGTTTCCTGTTCCCTTTCTCCTCTGGGGAACAAGACTTTA
TCTTGCCTCAGTAGCAGATATTCCTCTCCTCCATATAACGGACCCTAA

Peptide Sequence

PEP ID

XP_016497317.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM2 [Nicotiana tabacum]
Sequence

MGLSFSYPLASHSDLETSLESVIVKSIDFGYDEGKTLLQSVSFKSKDTEPTILQSDGFGK
MSIEKTVSFRTMENAMEFSKTSSEEKHEFNEFRRLDNMNGESPKSPLVYTNSPKHEAALK
LQKVYKSFRTRRKLADCAVLIEQSWWKLLDFAELKHSSISFFDLDKHETAVSRWSRARTR
AAKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHFYYVQWLHSQSKEPFFYWLDIGE
GKEVNIVDKCPRWKLQQQCIKYLGPMERKAYEVEVQDGKLFYKETGKLLNTTDEPKGAKW
IFVLSTSKTLYVGKKSKGTFQHSSFLAGGATLAAGRIVAEQGVLKAVWPHSGHYRPTPEN
FQDFVSFMRENNVDLNDVKLDSDEDEQESVGKKSGVFLRGNSSEDDFQKDVLETEANVLE
ESTSEKSDLKVQQNAADIQLSDSKPSHSFSSKLTNLQIPSNDDFLQKLKNESEATKSSSN
SFSLESPSDGYETAEELFALEKDQTDLEHSSSIEELEESKEEIIPEESIIQRINSHKDLK
SYQLGKQLSCKWSTGAGPRIGCLRDYPSQLQSHALEQVSLSPRSACRLKMSFPSRASTPT
TLSRVMQVSCSLSPLGNKTLSCLSSRYSSPPYNGP

Transcript Sequence

Gene sequence data has not been registered.